PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000289955
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 752aa    MW: 84743.7 Da    PI: 4.8756
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000289955genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.11.5e-18251581128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy.kvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkat 86 
                    +p GfrFhPtd+el+ ++L + v  ++     ++ ++ i e+d++ k+ Pw   +       e++++yfF++ +++++   r +r + + g+W+++
  MDP0000289955  25 MPLGFRFHPTDQELIXFFLYNXVLXREplmadCNNFNLIYEFDLFgKTPPWVVWEnfgGXGLEDQDLYFFCQLKTRSQ--ARIKReIDAGGTWSES 118
                    699********************999988877566678****9873678899864234334488999*****988764..68888456689***88 PP

            NAM  87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++  v++  +++  g k+ L + k  +   +  dW+++ey++
  MDP0000289955 119 NSK-LVKDLxNEKXXGKKRNLRYEK--EGCEHDGDWLLEEYSI 158
                    764.3333348999********984..4444589*******85 PP

2NAM26.12.3e-08493544148
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevd.iykvePwdLp 48 
                    +ppGfrF Ptd+elv +yL ++v + k     + ++++ +d   ++ePw + 
  MDP0000289955 493 VPPGFRFLPTDQELVGFYLSNRVVAGKkfmAYCRSFMHXFDpFGEMEPWVIW 544
                    69******************99766554643334468888735578999774 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.09E-1917183IPR003441NAC domain
PROSITE profilePS5100524.74625184IPR003441NAC domain
PfamPF023653.1E-1426158IPR003441NAC domain
SuperFamilySSF1019415.75E-11490605IPR003441NAC domain
PROSITE profilePS510057.209493641IPR003441NAC domain
PfamPF023652.1E-6494579IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 752 aa     Download sequence    Send to blast
MEAEXYGGXV PLGFYENPLL GSNGMPLGFR FHPTDQELIX FFLYNXVLXR EPLMADCNNF  60
NLIYEFDLFG KTPPWVVWEN FGGXGLEDQD LYFFCQLKTR SQARIKREID AGGTWSESNS  120
KLVKDLXNEK XXGKKRNLRY EKEGCEHDGD WLLEEYSILP SVVAGADDSD HEIGKVVLCR  180
LKKNSRSGNK KNXSNSTQQV NEQPAKKRAR KEVKEKPAKK KARKEVKQKP AKKKARNEVG  240
SQNTTSVITH TVEELQNCPS TSSAPVVPFD ESNYKMISDA INHDQQCISN IDGSTMPASF  300
SDHDYVPVSF ASEGGXSLLK XEDLLFENGE DMFFDLDDLL PPLDXGSXWS LXKLPQIDGT  360
QVPLPLDGMS FWNDSFKDVP VIRPPSRLRQ SMLLHHGTSV PASFKDIRTH LSLHHATHIG  420
DPNYSDXYLV GFYPTRFRTS TLLLXTLGXN DGSALVNARE NESNLQESKS RALVNLTMEN  480
FYGNTLMGSY GXVPPGFRFL PTDQELVGFY LSNRVVAGKK FMAYCRSFMH XFDPFGEMEP  540
WVIWENFGGR SLVDQDLCFK YKNEGCDQDG GWLLEEYSLR QTQEIVDGNG SDHKXRXVVL  600
CRLKKNPRCA NMXDHPTREL KEKPENERAR KSSSLVHXDE SNKKISGTNQ DQECKSGIDL  660
NAMPPDFSDH DCPTTTSGVC SCPICLDGGG GESLLEDEDF LLDDEDLLKG VDLSLGPPVQ  720
PQFEETQVVP RPASTGFEDX LTADESYFVN DR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008385056.10.0PREDICTED: NAC transcription factor 29-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.17e-11NAC family protein